:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'pbbam'
.. highlight: bash

pbbam
=====

.. conda:recipe:: pbbam
   :replaces_section_title:

   PacBio BAM C\+\+ library

   :homepage: https://github.com/PacificBiosciences/pbbam
   :license: BSD-3-Clause-Clear
   :recipe: /`pbbam <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pbbam>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pbbam/meta.yaml>`_

   


.. conda:package:: pbbam

   |downloads_pbbam| |docker_pbbam|

   :versions: 1.0.6-1, 1.0.6-0, 0.23.0-0, 0.19.0-1, 0.19.0-0, 0.18.0-4, 0.18.0-1, 0.18.0-0, 0.1-2, 0.1-1, 0.1-0
   
   :depends htslib: >=1.9,<1.10.0a0
   :depends libgcc-ng: >=7.3.0
   :depends libstdcxx-ng: >=7.3.0
   :depends pbcopper: 1.3.0.*
   :depends zlib: >=1.2.11,<1.3.0a0
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install pbbam

   and update with::

      conda update pbbam

   or use the docker container::

      docker pull quay.io/biocontainers/pbbam:<tag>

   (see `pbbam/tags`_ for valid values for ``<tag>``)


.. |downloads_pbbam| image:: https://img.shields.io/conda/dn/bioconda/pbbam.svg?style=flat
   :target: https://anaconda.org/bioconda/pbbam
   :alt:   (downloads)
.. |docker_pbbam| image:: https://quay.io/repository/biocontainers/pbbam/status
   :target: https://quay.io/repository/biocontainers/pbbam
.. _`pbbam/tags`: https://quay.io/repository/biocontainers/pbbam?tab=tags







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