:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pronto' .. highlight: bash pronto ====== .. conda:recipe:: pronto :replaces_section_title: :noindex: Python frontend to ontologies :homepage: https://github.com/althonos/pronto :documentation: https://pronto.readthedocs.io/en/stable/ :license: MIT / MIT :recipe: /`pronto `_/`meta.yaml `_ .. conda:package:: pronto |downloads_pronto| |docker_pronto| :versions: .. raw:: html
2.5.6-02.5.5-02.5.4-02.5.3-02.5.2-02.5.1-02.5.0-02.4.7-02.4.6-0 ``2.5.6-0``,  ``2.5.5-0``,  ``2.5.4-0``,  ``2.5.3-0``,  ``2.5.2-0``,  ``2.5.1-0``,  ``2.5.0-0``,  ``2.4.7-0``,  ``2.4.6-0``,  ``2.4.5-0``,  ``2.4.4-0``,  ``2.4.3-0``,  ``2.4.2-0``,  ``2.4.1-0``,  ``2.3.2-0``,  ``2.3.1-0``,  ``2.2.4-0``,  ``2.2.2-0``,  ``2.2.1-0``,  ``2.1.0-0``,  ``2.0.1-0``,  ``2.0.0-0``,  ``1.2.0-0``,  ``0.12.2-0``,  ``0.12.1-0``,  ``0.12.0-0``,  ``0.11.1-0``,  ``0.11.0-0``,  ``0.10.2-1``,  ``0.10.2-0``,  ``0.3.3-2``,  ``0.3.3-1``,  ``0.3.3-0`` .. raw:: html
:depends chardet: ``>=5.0`` :depends fastobo: ``>=0.12.2`` :depends networkx: ``>=2.3`` :depends python: ``>=3.7`` :depends python-dateutil: ``>=2.8`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pronto and update with:: mamba update pronto To create a new environment, run:: mamba create --name myenvname pronto with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pronto: (see `pronto/tags`_ for valid values for ````) .. |downloads_pronto| image:: https://img.shields.io/conda/dn/bioconda/pronto.svg?style=flat :target: https://anaconda.org/bioconda/pronto :alt: (downloads) .. |docker_pronto| image:: https://quay.io/repository/biocontainers/pronto/status :target: https://quay.io/repository/biocontainers/pronto .. _`pronto/tags`: https://quay.io/repository/biocontainers/pronto?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pronto/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pronto/README.html