:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pybedtools' .. highlight: bash pybedtools ========== .. conda:recipe:: pybedtools :replaces_section_title: :noindex: Wraps BEDTools for use in Python and adds many additional features. :homepage: https://github.com/daler/pybedtools :license: MIT :recipe: /`pybedtools `_/`meta.yaml `_ :links: biotools: :biotools:`pybedtools` .. conda:package:: pybedtools |downloads_pybedtools| |docker_pybedtools| :versions: .. raw:: html
0.9.0-10.9.0-00.8.2-10.8.2-00.8.1-30.8.1-20.8.1-10.8.1-00.8.0-1 ``0.9.0-1``,  ``0.9.0-0``,  ``0.8.2-1``,  ``0.8.2-0``,  ``0.8.1-3``,  ``0.8.1-2``,  ``0.8.1-1``,  ``0.8.1-0``,  ``0.8.0-1``,  ``0.8.0-0``,  ``0.7.10-3``,  ``0.7.10-2``,  ``0.7.10-1``,  ``0.7.10-0``,  ``0.7.9-0``,  ``0.7.8-1``,  ``0.7.7-1``,  ``0.7.6-1``,  ``0.7.5-0``,  ``0.7.4-0``,  ``0.7.2-1``,  ``0.7.0-1``,  ``0.6.9-6``,  ``0.6.9-5``,  ``0.6.9-4``,  ``0.6.9-3``,  ``0.6.9-2``,  ``0.6.9-1``,  ``0.6.9-0`` .. raw:: html
:depends bedtools: :depends libgcc-ng: ``>=10.3.0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends libzlib: ``>=1.2.11,<1.3.0a0`` :depends pandas: :depends pysam: ``>=0.16`` :depends python: ``>=3.6,<3.7.0a0`` :depends python_abi: ``3.6.* *_cp36m`` :depends six: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install pybedtools and update with:: conda update pybedtools or use the docker container:: docker pull quay.io/biocontainers/pybedtools: (see `pybedtools/tags`_ for valid values for ````) .. |downloads_pybedtools| image:: https://img.shields.io/conda/dn/bioconda/pybedtools.svg?style=flat :target: https://anaconda.org/bioconda/pybedtools :alt: (downloads) .. |docker_pybedtools| image:: https://quay.io/repository/biocontainers/pybedtools/status :target: https://quay.io/repository/biocontainers/pybedtools .. _`pybedtools/tags`: https://quay.io/repository/biocontainers/pybedtools?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pybedtools/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pybedtools/README.html