:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pyspoa' .. highlight: bash pyspoa ====== .. conda:recipe:: pyspoa :replaces_section_title: :noindex: Python binding to spoa library. :homepage: https://github.com/nanoporetech/pyspoa :documentation: https://github.com/nanoporetech/spoa :developer docs: https://github.com/nanoporetech/spoa :license: MIT / MIT :recipe: /`pyspoa `_/`meta.yaml `_ .. conda:package:: pyspoa |downloads_pyspoa| |docker_pyspoa| :versions: .. raw:: html
0.2.1-10.2.1-00.0.10-10.0.10-00.0.9-00.0.3-60.0.3-40.0.3-30.0.3-2 ``0.2.1-1``,  ``0.2.1-0``,  ``0.0.10-1``,  ``0.0.10-0``,  ``0.0.9-0``,  ``0.0.3-6``,  ``0.0.3-4``,  ``0.0.3-3``,  ``0.0.3-2``,  ``0.0.3-1``,  ``0.0.3-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pyspoa and update with:: mamba update pyspoa To create a new environment, run:: mamba create --name myenvname pyspoa with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pyspoa: (see `pyspoa/tags`_ for valid values for ````) .. |downloads_pyspoa| image:: https://img.shields.io/conda/dn/bioconda/pyspoa.svg?style=flat :target: https://anaconda.org/bioconda/pyspoa :alt: (downloads) .. |docker_pyspoa| image:: https://quay.io/repository/biocontainers/pyspoa/status :target: https://quay.io/repository/biocontainers/pyspoa .. _`pyspoa/tags`: https://quay.io/repository/biocontainers/pyspoa?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pyspoa/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pyspoa/README.html