:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'quicksect' .. highlight: bash quicksect ========= .. conda:recipe:: quicksect :replaces_section_title: :noindex: A cythonized\, extended version of the interval search tree in bx :homepage: https://github.com/brentp/quicksect :license: MIT / MIT :recipe: /`quicksect `_/`meta.yaml `_ .. conda:package:: quicksect |downloads_quicksect| |docker_quicksect| :versions: .. raw:: html
0.2.2-80.2.2-60.2.2-50.2.2-40.2.2-30.2.2-20.2.2-10.2.2-00.2.0-2 ``0.2.2-8``,  ``0.2.2-6``,  ``0.2.2-5``,  ``0.2.2-4``,  ``0.2.2-3``,  ``0.2.2-2``,  ``0.2.2-1``,  ``0.2.2-0``,  ``0.2.0-2``,  ``0.2.0-1``,  ``0.1.0-1``,  ``0.1.0-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install quicksect and update with:: mamba update quicksect To create a new environment, run:: mamba create --name myenvname quicksect with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/quicksect: (see `quicksect/tags`_ for valid values for ````) .. |downloads_quicksect| image:: https://img.shields.io/conda/dn/bioconda/quicksect.svg?style=flat :target: https://anaconda.org/bioconda/quicksect :alt: (downloads) .. |docker_quicksect| image:: https://quay.io/repository/biocontainers/quicksect/status :target: https://quay.io/repository/biocontainers/quicksect .. _`quicksect/tags`: https://quay.io/repository/biocontainers/quicksect?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/quicksect/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/quicksect/README.html