:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-ddir' .. highlight: bash r-ddir ====== .. conda:recipe:: r-ddir :replaces_section_title: :noindex: An R package to access to Omics Discovery Index API :homepage: https://github.com/OmicsDI/ddiR :license: GPL2 :recipe: /`r-ddir `_/`meta.yaml `_ .. conda:package:: r-ddir |downloads_r-ddir| |docker_r-ddir| :versions: ``0.0.3-5``,  ``0.0.3-4``,  ``0.0.3-3``,  ``0.0.3-2``,  ``0.0.3-1``,  ``0.0.3-0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-rjsonio: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r-ddir and update with:: mamba update r-ddir To create a new environment, run:: mamba create --name myenvname r-ddir with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r-ddir: (see `r-ddir/tags`_ for valid values for ````) .. |downloads_r-ddir| image:: https://img.shields.io/conda/dn/bioconda/r-ddir.svg?style=flat :target: https://anaconda.org/bioconda/r-ddir :alt: (downloads) .. |docker_r-ddir| image:: https://quay.io/repository/biocontainers/r-ddir/status :target: https://quay.io/repository/biocontainers/r-ddir .. _`r-ddir/tags`: https://quay.io/repository/biocontainers/r-ddir?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-ddir/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-ddir/README.html