:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-merge-kallisto' .. highlight: bash r-merge-kallisto ================ .. conda:recipe:: r-merge-kallisto :replaces_section_title: :noindex: merge\_kallisto :homepage: https://github.com/zavolanlab/merge_kallisto :license: APACHE / Apache License 2.0 :recipe: /`r-merge-kallisto `_/`meta.yaml `_ .. conda:package:: r-merge-kallisto |downloads_r-merge-kallisto| |docker_r-merge-kallisto| :versions: ``0.6-3``,  ``0.6-2``,  ``0.6-1``,  ``0.6-0`` :depends bioconductor-rhdf5: :depends bioconductor-rtracklayer: :depends bioconductor-tximport: :depends coreutils: :depends r-base: :depends r-optparse: :depends r-rcpp: :depends rsync: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r-merge-kallisto and update with:: mamba update r-merge-kallisto To create a new environment, run:: mamba create --name myenvname r-merge-kallisto with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r-merge-kallisto: (see `r-merge-kallisto/tags`_ for valid values for ````) .. |downloads_r-merge-kallisto| image:: https://img.shields.io/conda/dn/bioconda/r-merge-kallisto.svg?style=flat :target: https://anaconda.org/bioconda/r-merge-kallisto :alt: (downloads) .. |docker_r-merge-kallisto| image:: https://quay.io/repository/biocontainers/r-merge-kallisto/status :target: https://quay.io/repository/biocontainers/r-merge-kallisto .. _`r-merge-kallisto/tags`: https://quay.io/repository/biocontainers/r-merge-kallisto?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-merge-kallisto/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-merge-kallisto/README.html