:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'r-ramclustr'
.. highlight: bash

r-ramclustr
===========

.. conda:recipe:: r-ramclustr
   :replaces_section_title:
   :noindex:

   A feature clustering algorithm for non\-targeted mass spectrometric metabolomics data. This method is compatible with gas and liquid chromatography coupled mass spectrometry\, including indiscriminant tandem mass spectrometry data \<DOI\: 10.1021\/ac501530d\>.

   :homepage: https://github.com/cbroeckl/RAMClustR
   :license: GPL2 / GPL-2.0-or-later
   :recipe: /`r-ramclustr <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-ramclustr>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-ramclustr/meta.yaml>`_

   


.. conda:package:: r-ramclustr

   |downloads_r-ramclustr| |docker_r-ramclustr|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>1.3.1-1</code>,  <code>1.3.1-0</code>,  <code>1.3.0-1</code>,  <code>1.3.0-0</code>,  <code>1.2.4-1</code>,  <code>1.2.4-0</code>,  <code>1.2.3-0</code>,  <code>1.2.2-0</code>,  <code>1.2.1-1</code>,  </span></summary>
      

      ``1.3.1-1``,  ``1.3.1-0``,  ``1.3.0-1``,  ``1.3.0-0``,  ``1.2.4-1``,  ``1.2.4-0``,  ``1.2.3-0``,  ``1.2.2-0``,  ``1.2.1-1``,  ``1.2.1-0``,  ``1.0.9-1``,  ``1.0.9-0``

      
      .. raw:: html

         </details>
      

   
   :depends bioconductor-msnbase: 
   :depends bioconductor-pcamethods: 
   :depends r-base: ``>=4.3,<4.4.0a0``
   :depends r-biocmanager: 
   :depends r-dynamictreecut: 
   :depends r-e1071: 
   :depends r-fastcluster: 
   :depends r-ggplot2: 
   :depends r-gplots: 
   :depends r-httr: 
   :depends r-interpretmsspectrum: 
   :depends r-jsonlite: 
   :depends r-rcurl: 
   :depends r-readxl: 
   :depends r-stringi: 
   :depends r-stringr: 
   :depends r-webchem: 
   :depends r-xml2: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install r-ramclustr

   and update with::

      mamba update r-ramclustr

  To create a new environment, run::

      mamba create --name myenvname r-ramclustr

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/r-ramclustr:<tag>

   (see `r-ramclustr/tags`_ for valid values for ``<tag>``)


.. |downloads_r-ramclustr| image:: https://img.shields.io/conda/dn/bioconda/r-ramclustr.svg?style=flat
   :target: https://anaconda.org/bioconda/r-ramclustr
   :alt:   (downloads)
.. |docker_r-ramclustr| image:: https://quay.io/repository/biocontainers/r-ramclustr/status
   :target: https://quay.io/repository/biocontainers/r-ramclustr
.. _`r-ramclustr/tags`: https://quay.io/repository/biocontainers/r-ramclustr?tab=tags


.. raw:: html

    <script>
        var package = "r-ramclustr";
        var versions = ["1.3.1","1.3.1","1.3.0","1.3.0","1.2.4"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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