:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-stitch' .. highlight: bash r-stitch ======== .. conda:recipe:: r-stitch :replaces_section_title: :noindex: STITCH \- Sequencing To Imputation Through Constructing Haplotypes :homepage: https://github.com/rwdavies/stitch :license: GPL3 / GPL3 :recipe: /`r-stitch `_/`meta.yaml `_ .. conda:package:: r-stitch |downloads_r-stitch| |docker_r-stitch| :versions: .. raw:: html
1.6.6-21.6.6-11.6.6-01.6.5-31.6.5-21.6.5-01.6.3-11.6.3-01.6.2-0 ``1.6.6-2``,  ``1.6.6-1``,  ``1.6.6-0``,  ``1.6.5-3``,  ``1.6.5-2``,  ``1.6.5-0``,  ``1.6.3-1``,  ``1.6.3-0``,  ``1.6.2-0``,  ``1.6.0-1``,  ``1.6.0-0``,  ``1.5.7-0``,  ``1.5.5-0``,  ``1.5.4-0`` .. raw:: html
:depends gmp: ``>=6.2.1,<7.0a0`` :depends htslib: ``>=1.4`` :depends libblas: ``>=3.8.0,<4.0a0`` :depends libgcc-ng: ``>=10.3.0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends libzlib: ``>=1.2.11,<1.3.0a0`` :depends mpc: ``>=1.1.0`` :depends mpc: ``>=1.2.1,<2.0a0`` :depends mpfr: ``>=4.1.0,<5.0a0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-data.table: ``>=1.11.8`` :depends r-rcpp: ``>=0.12.18`` :depends r-rcpparmadillo: ``>=0.8.600.0.0`` :depends r-rrbgen: ``>=0.0.6`` :depends r-testthat: ``>=2.0.0`` :depends rsync: :depends samtools: ``>=1.4`` :depends xz: ``>=5.2.5,<5.3.0a0`` :depends zlib: ``>=1.2.11,<1.3.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install r-stitch and update with:: conda update r-stitch or use the docker container:: docker pull quay.io/biocontainers/r-stitch: (see `r-stitch/tags`_ for valid values for ````) .. |downloads_r-stitch| image:: https://img.shields.io/conda/dn/bioconda/r-stitch.svg?style=flat :target: https://anaconda.org/bioconda/r-stitch :alt: (downloads) .. |docker_r-stitch| image:: https://quay.io/repository/biocontainers/r-stitch/status :target: https://quay.io/repository/biocontainers/r-stitch .. _`r-stitch/tags`: https://quay.io/repository/biocontainers/r-stitch?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-stitch/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-stitch/README.html