:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'rdeval' .. highlight: bash rdeval ====== .. conda:recipe:: rdeval :replaces_section_title: :noindex: A general purpose\, multithreaded read analysis and manipulation tool. :homepage: https://github.com/vgl-hub/rdeval :documentation: https://github.com/vgl-hub/rdeval/blob/v0.0.5/README.md :license: MIT / MIT :recipe: /`rdeval `_/`meta.yaml `_ .. conda:package:: rdeval |downloads_rdeval| |docker_rdeval| :versions: ``0.0.5-0``,  ``0.0.4-0``,  ``0.0.3-0``,  ``0.0.2-1``,  ``0.0.2-0`` :depends htslib: ``>=1.21,<1.22.0a0`` :depends libgcc: ``>=13`` :depends libstdcxx: ``>=13`` :depends libzlib: ``>=1.3.1,<2.0a0`` :depends openssl: ``>=3.4.0,<4.0a0`` :requirements: :additional platforms: .. raw:: html linux-aarch64osx-arm64 .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install rdeval and update with:: mamba update rdeval To create a new environment, run:: mamba create --name myenvname rdeval with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/rdeval: (see `rdeval/tags`_ for valid values for ````) .. |downloads_rdeval| image:: https://img.shields.io/conda/dn/bioconda/rdeval.svg?style=flat :target: https://anaconda.org/bioconda/rdeval :alt: (downloads) .. |docker_rdeval| image:: https://quay.io/repository/biocontainers/rdeval/status :target: https://quay.io/repository/biocontainers/rdeval .. _`rdeval/tags`: https://quay.io/repository/biocontainers/rdeval?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/rdeval/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/rdeval/README.html