:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'seqlogo' .. highlight: bash seqlogo ======= .. conda:recipe:: seqlogo :replaces_section_title: :noindex: Python port of the R Bioconductor \`seqlogo\` package :homepage: https://github.com/betteridiot/seqlogo :license: BSD / BSD :recipe: /`seqlogo `_/`meta.yaml `_ .. conda:package:: seqlogo |downloads_seqlogo| |docker_seqlogo| :versions: .. raw:: html
5.29.8-05.29.7-05.29.6-05.29.5-05.29.4-05.29.1-05.2.9-10.2.0-00.1.13-0 ``5.29.8-0``,  ``5.29.7-0``,  ``5.29.6-0``,  ``5.29.5-0``,  ``5.29.4-0``,  ``5.29.1-0``,  ``5.2.9-1``,  ``0.2.0-0``,  ``0.1.13-0``,  ``0.1.12-0`` .. raw:: html
:depends ghostscript: :depends numpy: :depends pandas: :depends python: ``>=3`` :depends weblogo: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install seqlogo and update with:: mamba update seqlogo To create a new environment, run:: mamba create --name myenvname seqlogo with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/seqlogo: (see `seqlogo/tags`_ for valid values for ````) .. |downloads_seqlogo| image:: https://img.shields.io/conda/dn/bioconda/seqlogo.svg?style=flat :target: https://anaconda.org/bioconda/seqlogo :alt: (downloads) .. |docker_seqlogo| image:: https://quay.io/repository/biocontainers/seqlogo/status :target: https://quay.io/repository/biocontainers/seqlogo .. _`seqlogo/tags`: https://quay.io/repository/biocontainers/seqlogo?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/seqlogo/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/seqlogo/README.html