:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'vmatch' .. highlight: bash vmatch ====== .. conda:recipe:: vmatch :replaces_section_title: :noindex: The Vmatch large scale sequence analysis software :homepage: http://www.vmatch.de/ :license: OTHER / Unknown :recipe: /`vmatch `_/`meta.yaml `_ :links: biotools: :biotools:`vmatch` .. conda:package:: vmatch |downloads_vmatch| |docker_vmatch| :versions: ``2.3.0-6``,  ``2.3.0-5``,  ``2.3.0-4``,  ``2.3.0-3``,  ``2.3.0-2``,  ``2.3.0-1``,  ``2.3.0-0`` :depends perl: ``>=5.10,<6`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install vmatch and update with:: mamba update vmatch To create a new environment, run:: mamba create --name myenvname vmatch with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/vmatch: (see `vmatch/tags`_ for valid values for ````) .. |downloads_vmatch| image:: https://img.shields.io/conda/dn/bioconda/vmatch.svg?style=flat :target: https://anaconda.org/bioconda/vmatch :alt: (downloads) .. |docker_vmatch| image:: https://quay.io/repository/biocontainers/vmatch/status :target: https://quay.io/repository/biocontainers/vmatch .. _`vmatch/tags`: https://quay.io/repository/biocontainers/vmatch?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/vmatch/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/vmatch/README.html