:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'wgdi' .. highlight: bash wgdi ==== .. conda:recipe:: wgdi :replaces_section_title: :noindex: Whole Genome Duplication Identification :homepage: https://github.com/SunPengChuan/wgdi :license: BSD / BSD :recipe: /`wgdi `_/`meta.yaml `_ Python utility libraries on comparative genomics .. conda:package:: wgdi |downloads_wgdi| |docker_wgdi| :versions: .. raw:: html
0.5.4-00.5.3-00.5.2-00.5.1-10.5.1-00.4.9-00.4.7-00.4.6-00.4.5-0 ``0.5.4-0``,  ``0.5.3-0``,  ``0.5.2-0``,  ``0.5.1-1``,  ``0.5.1-0``,  ``0.4.9-0``,  ``0.4.7-0``,  ``0.4.6-0``,  ``0.4.5-0``,  ``0.4.4-0``,  ``0.4.1-0`` .. raw:: html
:depends biopython: :depends iqtree: :depends mafft: :depends matplotlib-base: :depends muscle: :depends numpy: :depends pal2nal: :depends paml: :depends pandas: ``>=1.1.0`` :depends python: ``>=3`` :depends scipy: :depends trimal: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install wgdi and update with:: conda update wgdi or use the docker container:: docker pull quay.io/biocontainers/wgdi: (see `wgdi/tags`_ for valid values for ````) .. |downloads_wgdi| image:: https://img.shields.io/conda/dn/bioconda/wgdi.svg?style=flat :target: https://anaconda.org/bioconda/wgdi :alt: (downloads) .. |docker_wgdi| image:: https://quay.io/repository/biocontainers/wgdi/status :target: https://quay.io/repository/biocontainers/wgdi .. _`wgdi/tags`: https://quay.io/repository/biocontainers/wgdi?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/wgdi/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/wgdi/README.html