-
recipe
bioconductor-aspediafi
ASpedia-FI: Functional Interaction Analysis of Alternative Splicing Events
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/ASpediaFI.html
- License
GPL-3
- Recipe
This package provides functionalities for a systematic and integrative analysis of alternative splicing events and their functional interactions.
-
package
bioconductor-aspediafi
¶ -
- Versions
1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends
bioconductor-biocparallel
>=1.24.0,<1.25.0
bioconductor-biomart
>=2.46.0,<2.47.0
bioconductor-fgsea
>=1.16.0,<1.17.0
bioconductor-genomeinfodb
>=1.26.0,<1.27.0
bioconductor-genomicalignments
>=1.26.0,<1.27.0
bioconductor-genomicfeatures
>=1.42.0,<1.43.0
bioconductor-genomicranges
>=1.42.0,<1.43.0
bioconductor-gviz
>=1.34.0,<1.35.0
bioconductor-iranges
>=2.24.0,<2.25.0
bioconductor-ivas
>=2.10.0,<2.11.0
bioconductor-limma
>=3.46.0,<3.47.0
bioconductor-rsamtools
>=2.6.0,<2.7.0
bioconductor-rtracklayer
>=1.50.0,<1.51.0
bioconductor-s4vectors
>=0.28.0,<0.29.0
bioconductor-summarizedexperiment
>=1.20.0,<1.21.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-aspediafi
and update with:
conda update bioconductor-aspediafi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-aspediafi:<tag>
(see bioconductor-aspediafi/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-aspediafi/README.html)