- recipe bioconductor-aspediafi
ASpedia-FI: Functional Interaction Analysis of Alternative Splicing Events
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/ASpediaFI.html
- License
GPL-3
- Recipe
This package provides functionalities for a systematic and integrative analysis of alternative splicing events and their functional interactions.
- package bioconductor-aspediafi¶
-
- Versions
1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends
bioconductor-biocparallel
>=1.28.0,<1.29.0
bioconductor-biomart
>=2.50.0,<2.51.0
bioconductor-fgsea
>=1.20.0,<1.21.0
bioconductor-genomeinfodb
>=1.30.0,<1.31.0
bioconductor-genomicalignments
>=1.30.0,<1.31.0
bioconductor-genomicfeatures
>=1.46.0,<1.47.0
bioconductor-genomicranges
>=1.46.0,<1.47.0
bioconductor-gviz
>=1.38.0,<1.39.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-ivas
>=2.14.0,<2.15.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-rsamtools
>=2.10.0,<2.11.0
bioconductor-rtracklayer
>=1.54.0,<1.55.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-aspediafi
and update with:
conda update bioconductor-aspediafi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-aspediafi:<tag>
(see bioconductor-aspediafi/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-aspediafi/README.html)