recipe bioconductor-autotuner

Automated parameter selection for untargeted metabolomics data processing

Homepage

https://bioconductor.org/packages/3.14/bioc/html/Autotuner.html

License

MIT + file LICENSE

Recipe

/bioconductor-autotuner/meta.yaml

This package is designed to help faciliate data processing in untargeted metabolomics. To do this, the algorithm contained within the package performs statistical inference on raw data to come up with the best set of parameters to process the raw data.

package bioconductor-autotuner

Versions

1.7.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0,  1.0.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-msnbase >=2.20.0,<2.21.0

• bioconductor-mzr >=2.28.0,<2.29.0

• r-assertthat

• r-base >=4.1,<4.2.0a0

• r-cluster

• r-entropy

• r-rcolorbrewer

• r-scales

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-autotuner

and update with:

conda update bioconductor-autotuner

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-autotuner:<tag>

(see bioconductor-autotuner/tags for valid values for <tag>)

Download stats

Link to this page

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