recipe bioconductor-brainimager

BrainImageR is a package that provides the user with information of where in the human brain their gene set corresponds to. This is provided both as a continuous variable and as a easily-interpretable image. BrainImageR has additional functionality of identifying approximately when in developmental time that a gene expression dataset corresponds to. Both the spatial gene set enrichment and the developmental time point prediction are assessed in comparison to the Allen Brain Atlas reference data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/brainImageR.html

License

CC BY-SA 4.0

Recipe

/bioconductor-brainimager/meta.yaml

package bioconductor-brainimager

(downloads) docker_bioconductor-brainimager

Versions

1.1.0-1, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-brainimager

and update with:

conda update bioconductor-brainimager

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-brainimager:<tag>

(see bioconductor-brainimager/tags for valid values for <tag>)