recipe bioconductor-camthc

An R package for tissue heterogeneity characterization by convex analysis of mixtures (CAM). It provides basic functions to perform unsupervised deconvolution on mixture expression profiles by CAM and some auxiliary functions to help understand the subpopulation-specific results. It also implements functions to perform supervised deconvolution based on prior knowledge of molecular markers, S matrix or A matrix. Combining molecular markers from CAM and from prior knowledge can achieve semi-supervised deconvolution of mixtures.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/CAMTHC.html

License

GPL-2

Recipe

/bioconductor-camthc/meta.yaml

package bioconductor-camthc

(downloads) docker_bioconductor-camthc

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-camthc

and update with:

conda update bioconductor-camthc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-camthc:<tag>

(see bioconductor-camthc/tags for valid values for <tag>)