recipe bioconductor-caomicsv

Visualization of multi-dimentional cancer genomics data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/caOmicsV.html

License

GPL (>=2.0)

Recipe

/bioconductor-caomicsv/meta.yaml

caOmicsV package provides methods to visualize multi-dimentional cancer genomics data including of patient information, gene expressions, DNA methylations, DNA copy number variations, and SNP/mutations in matrix layout or network layout.

package bioconductor-caomicsv

Versions

1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.1-0

Depends

• r-base >=4.0,<4.1.0a0

• r-bc3net >=1.0.2

• r-igraph >=0.7.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-caomicsv

and update with:

conda update bioconductor-caomicsv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-caomicsv:<tag>

(see bioconductor-caomicsv/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-caomicsv/README.html)