bioconductor-deseq

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Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution

Home http://bioconductor.org/packages/release/bioc/html/DESeq.html
Versions 1.22.1, 1.24.0
License GPL (>= 3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-deseq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-deseq

and update with:

conda update bioconductor-deseq

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-deseq.