recipe bioconductor-genoset

GenoSet provides an extension of the RangedSummarizedExperiment class with additional API features. This class provides convenient and fast methods for working with segmented genomic data. Additionally, GenoSet provides the class RleDataFrame which stores runs of data along the genome for multiple samples and provides very fast summaries of arbitrary row sets (regions of the genome).

Homepage

https://bioconductor.org/packages/3.9/bioc/html/genoset.html

License

Artistic-2.0

Recipe

/bioconductor-genoset/meta.yaml

Links

biotools: genoset, doi: 10.1038/nmeth.3252

package bioconductor-genoset

(downloads) docker_bioconductor-genoset

Versions

1.40.0-1, 1.38.0-0, 1.36.0-0, 1.34.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-genoset

and update with:

conda update bioconductor-genoset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-genoset:<tag>

(see bioconductor-genoset/tags for valid values for <tag>)