recipe bioconductor-ggdata

all 90 hapmap CEU samples, 47K expression, 4mm SNP

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/GGdata.html

License

LGPL

Recipe

/bioconductor-ggdata/meta.yaml

data exemplars dealing with hapmap SNP reports, GWAS, etc.

package bioconductor-ggdata

Versions

1.26.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-0

Depends

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-ggbase >=3.50.0,<3.51.0

• bioconductor-illuminahumanv1.db >=1.26.0,<1.27.0

• bioconductor-snpstats >=1.38.0,<1.39.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ggdata

and update with:

conda update bioconductor-ggdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ggdata:<tag>

(see bioconductor-ggdata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ggdata/README.html)