- recipe bioconductor-mapkl
A Hybrid Feature Selection method for gene expression data
- Homepage
- License
GPL (>= 2)
- Recipe
We propose a hybrid FS method (mAP-KL), which combines multiple hypothesis testing and affinity propagation (AP)-clustering algorithm along with the Krzanowski & Lai cluster quality index, to select a small yet informative subset of genes.
- package bioconductor-mapkl¶
-
- Versions
1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.1-0
,1.12.0-0
- Depends
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-multtest
>=2.50.0,<2.51.0
bioconductor-reactome.db
>=1.77.0,<1.78.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-mapkl
and update with:
conda update bioconductor-mapkl
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mapkl:<tag>
(see bioconductor-mapkl/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mapkl/README.html)