recipe bioconductor-mirsponge

This package provides several functions to study miRNA sponge (also called ceRNA or miRNA decoy), including popular methods for identifying miRNA sponge interactions, and the integrative method to integrate miRNA sponge interactions from different methods, as well as the functions to validate miRNA sponge interactions, and infer miRNA sponge modules, conduct enrichment analysis of modules, and conduct survival analysis of modules.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/miRsponge.html

License

GPL-3

Recipe

/bioconductor-mirsponge/meta.yaml

package bioconductor-mirsponge

(downloads) docker_bioconductor-mirsponge

Versions

1.8.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mirsponge

and update with:

conda update bioconductor-mirsponge

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mirsponge:<tag>

(see bioconductor-mirsponge/tags for valid values for <tag>)