bioconductor-mmdiff

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This package detects statistically significant difference between read enrichment profiles in different ChIP-Seq samples. To take advantage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD).

Home http://bioconductor.org/packages/release/bioc/html/MMDiff.html
Versions 1.10.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mmdiff

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mmdiff

and update with:

conda update bioconductor-mmdiff

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mmdiff.