-
recipe
bioconductor-panvizgenerator
Generate PanViz visualisations from your pangenome
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/PanVizGenerator.html
- License
GPL (>= 2)
- Recipe
PanViz is a JavaScript based visualisation tool for functionaly annotated pangenomes. PanVizGenerator is a companion for PanViz that facilitates the necessary data preprocessing step necessary to create a working PanViz visualization. The output is fully self-contained so the recipient of the visualization does not need R or PanVizGenerator installed.
-
package
bioconductor-panvizgenerator
¶ -
- Versions
1.18.0-0
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.10.0-0
- Depends
bioconductor-findmyfriends
>=1.20.0,<1.21.0
bioconductor-pcamethods
>=1.82.0,<1.83.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-panvizgenerator
and update with:
conda update bioconductor-panvizgenerator
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-panvizgenerator:<tag>
(see bioconductor-panvizgenerator/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-panvizgenerator/README.html)