- recipe bioconductor-plethy
R framework for exploration and analysis of respirometry data
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/plethy.html
- License
GPL-3
- Recipe
- Links
biotools: plethy, doi: 10.1186/s12859-015-0547-7
This package provides the infrastructure and tools to import, query and perform basic analysis of whole body plethysmography and metabolism data. Currently support is limited to data derived from Buxco respirometry instruments as exported by their FinePointe software.
- package bioconductor-plethy¶
-
- Versions
1.32.0-0
,1.30.0-0
,1.28.0-1
,1.28.0-0
,1.26.0-0
,1.24.0-0
,1.22.0-1
,1.20.0-0
,1.18.0-0
,1.32.0-0
,1.30.0-0
,1.28.0-1
,1.28.0-0
,1.26.0-0
,1.24.0-0
,1.22.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-streamer
>=1.40.0,<1.41.0
r-base
>=4.1,<4.2.0a0
r-dbi
>=0.5-1
r-rsqlite
>=1.1
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-plethy
and update with:
conda update bioconductor-plethy
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-plethy:<tag>
(see bioconductor-plethy/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-plethy/README.html)