- recipe bioconductor-rpsixml
R interface to PSI-MI 2.5 files
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/RpsiXML.html
- License
LGPL-3
- Recipe
- Links
biotools: rpsixml, doi: 10.1007/978-1-60761-987-1_9
Queries, data structure and interface to visualization of interaction datasets. This package inplements the PSI-MI 2.5 standard and supports up to now 8 databases. Further databases supporting PSI-MI 2.5 standard will be added continuously.
- package bioconductor-rpsixml¶
-
- Versions
2.36.0-0
,2.34.0-0
,2.32.0-1
,2.32.0-0
,2.30.0-0
,2.28.0-0
,2.26.0-1
,2.24.0-0
,2.22.0-0
,2.36.0-0
,2.34.0-0
,2.32.0-1
,2.32.0-0
,2.30.0-0
,2.28.0-0
,2.26.0-1
,2.24.0-0
,2.22.0-0
,2.20.0-0
- Depends
bioconductor-annotate
>=1.72.0,<1.73.0
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-graph
>=1.72.0,<1.73.0
bioconductor-hypergraph
>=1.66.0,<1.67.0
bioconductor-rbgl
>=1.70.0,<1.71.0
r-base
>=4.1,<4.2.0a0
r-xml
>=2.4.0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rpsixml
and update with:
conda update bioconductor-rpsixml
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rpsixml:<tag>
(see bioconductor-rpsixml/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rpsixml/README.html)