recipe bioconductor-samexplorer

This R package is designed for subsampling procedure to simulate sequencing experiments with reduced sequencing depth. This package can be used to anlayze data generated from all major sequencing platforms such as Illumina GA, HiSeq, MiSeq, Roche GS-FLX, ABI SOLiD and LifeTech Ion PGM Proton sequencers. It supports multiple operating systems incluidng Linux, Mac OS X, FreeBSD and Solaris. Was developed with usage of Rsubread.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/samExploreR.html

License

GPL-3

Recipe

/bioconductor-samexplorer/meta.yaml

package bioconductor-samexplorer

(downloads) docker_bioconductor-samexplorer

Versions

1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-samexplorer

and update with:

conda update bioconductor-samexplorer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-samexplorer:<tag>

(see bioconductor-samexplorer/tags for valid values for <tag>)