recipe bioconductor-scalign

An unsupervised deep learning method for data alignment, integration and estimation of per-cell differences in -omic data (e.g. gene expression) across datasets (conditions, tissues, species). See Johansen and Quon (2019) <doi:10.1101/504944> for more details.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/scAlign.html

License

GPL-3

Recipe

/bioconductor-scalign/meta.yaml

package bioconductor-scalign

(downloads) docker_bioconductor-scalign

Versions

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scalign

and update with:

conda update bioconductor-scalign

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scalign:<tag>

(see bioconductor-scalign/tags for valid values for <tag>)