recipe bioconductor-slgi

Synthetic Lethal Genetic Interaction

Homepage

https://bioconductor.org/packages/3.11/bioc/html/SLGI.html

License

Artistic-2.0

Recipe

/bioconductor-slgi/meta.yaml

Links

biotools: slgi, doi: 10.1186/gb-2008-9-9-r135

A variety of data files and functions for the analysis of genetic interactions

package bioconductor-slgi

Versions

1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-0,  1.40.0-0,  1.38.0-0

Depends

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-go.db >=3.11.0,<3.12.0

• bioconductor-scisi >=1.60.0,<1.61.0

• r-base >=4.0,<4.1.0a0

• r-lattice

Required By

• bioconductor-pcpheno

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-slgi

and update with:

conda update bioconductor-slgi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-slgi:<tag>

(see bioconductor-slgi/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-slgi/README.html)