recipe bioconductor-sushi

Tools for visualizing genomics data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/Sushi.html

License

GPL (>= 2)

Recipe

/bioconductor-sushi/meta.yaml

Links

biotools: sushi, doi: 10.1093/bioinformatics/btu379

Flexible, quantitative, and integrative genomic visualizations for publication-quality multi-panel figures

package bioconductor-sushi

Versions

1.26.0-0,  1.23.0-0,  1.22.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-0

Depends

• bioconductor-biomart >=2.44.0,<2.45.0

• r-base >=4.0,<4.1.0a0

• r-zoo

Required By

• srnapipe

• bioconductor-diffloop

• bioconductor-vasp

• bioconductor-ularcirc

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sushi

and update with:

conda update bioconductor-sushi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sushi:<tag>

(see bioconductor-sushi/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-sushi/README.html)