- recipe bioconductor-tcgabiolinksgui
"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/TCGAbiolinksGUI.html
- License
GPL (>= 3)
- Recipe
"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data. A demo version of GUI is found in https://tcgabiolinksgui.shinyapps.io/tcgabiolinks/"
- package bioconductor-tcgabiolinksgui¶
-
- Versions
1.20.0-0
,1.18.0-0
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-1
,1.10.0-1
,1.8.0-0
- Depends
bioconductor-clusterprofiler
>=4.2.0,<4.3.0
bioconductor-elmer
>=2.18.0,<2.19.0
bioconductor-maftools
>=2.10.0,<2.11.0
bioconductor-pathview
>=1.34.0,<1.35.0
bioconductor-sesame
>=1.12.0,<1.13.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
bioconductor-tcgabiolinks
>=2.22.0,<2.23.0
bioconductor-tcgabiolinksgui.data
>=1.14.0,<1.15.0
r-base
>=4.1,<4.2.0a0
r-downloader
>=0.4
r-ggplot2
>=2.1.0
r-shiny
>=0.14.1
r-shinybs
>=0.61
r-shinydashboard
>=0.5.3
r-shinyfiles
>=0.6.2
r-shinyjs
>=0.7
r-stringr
>=1.1.0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-tcgabiolinksgui
and update with:
conda update bioconductor-tcgabiolinksgui
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-tcgabiolinksgui:<tag>
(see bioconductor-tcgabiolinksgui/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-tcgabiolinksgui/README.html)