cramtools

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A set of Java tools and APIs for efficient compression of sequence read data

Home http://www.ebi.ac.uk/ena/software/cram-toolkit
Versions 3.0.b127, 3.0.b47
License Apache v2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/cramtools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cramtools

and update with:

conda update cramtools

docker

A Docker container is available at https://quay.io/repository/biocontainers/cramtools.