recipe metaphlan2/2.7.7

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data with species level resolution. From version 2.0 MetaPhlAn is also able to identify specific strains (in the not-so-frequent cases in which the sample contains a previously sequenced strains) and to track strains across samples for all species.

Homepage

https://bitbucket.org/biobakery/metaphlan2

License

MIT / MIT License

Recipe

/metaphlan2/2.7.7/meta.yaml

package metaphlan2

(downloads) docker_metaphlan2

Versions

2.7.8-0, 2.7.7-4, 2.7.7-3, 2.7.7-2, 2.7.7-1, 2.7.5-1, 2.7.5-0, 2.6.0-2, 2.6.0-1, 2.5.0-2, 2.5.0-0, 2.2.0-1, 2.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install metaphlan2

and update with:

conda update metaphlan2

or use the docker container:

docker pull quay.io/biocontainers/metaphlan2:<tag>

(see metaphlan2/tags for valid values for <tag>)