r-batch

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Functions to allow you to easily pass command-line arguments into R, and functions to aid in submitting your R code in parallel on a cluster and joining the results afterward (e.g. multiple parameter values for simulations running in parallel, splitting up a permutation test in parallel, etc.). See parseCommandArgs(...) for the main example of how to use this package.

Home http://sites.google.com/site/thomashoffmannproject/
Versions 1.1_4
License GPL
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-batch

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-batch

and update with:

conda update r-batch

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-batch.