r-genenet

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Analyzes gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).

Home http://strimmerlab.org/software/genenet/
Versions 1.2.13
License GPL (>= 3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-genenet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-genenet

and update with:

conda update r-genenet

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-genenet.