recipe r-genometricorr

Genometric Correlation (GenometriCorr) is an R package for spatial correlation of genome-wide interval datasets.

Homepage

http://genometricorr.sourceforge.net

License

Artistic-2.0

Recipe

/r-genometricorr/meta.yaml

Links

doi: 10.1371/journal.pcbi.1002529

package r-genometricorr

Versions

1.1.17-0

Depends

• bioconductor-genomeinfodb

• bioconductor-genomicfeatures

• bioconductor-genomicranges

• bioconductor-iranges

• bioconductor-rtracklayer

• bioconductor-s4vectors

• bioconductor-txdb.hsapiens.ucsc.hg19.knowngene

• r-base >=3.1.0

• r-gdata

• r-gplots

• r-rcurl

• r-tcltk2

• xorg-libx11

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-genometricorr

and update with:

conda update r-genometricorr

or use the docker container:

docker pull quay.io/biocontainers/r-genometricorr:<tag>

(see r-genometricorr/tags for valid values for <tag>)

Link to this page

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