r-ggdendro

downloads

This is a set of tools for dendrograms and tree plots using ‘ggplot2’. The ‘ggplot2’ philosophy is to clearly separate data from the presentation. Unfortunately the plot method for dendrograms plots directly to a plot device without exposing the data. The ‘ggdendro’ package resolves this by making available functions that extract the dendrogram plot data. The package provides implementations for tree, rpart, as well as diana and agnes cluster diagrams.

Home https://github.com/andrie/ggdendro
Versions 0.1_17
License GPL-2 | GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-ggdendro

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-ggdendro

and update with:

conda update r-ggdendro

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-ggdendro.