r-rann

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Finds the k nearest neighbours for every point in a given dataset in O(N log N) time using Arya and Mount’s ANN library (v1.1.3). There is support for approximate as well as exact searches, fixed radius searches and bd as well as kd trees.

Home https://github.com/jefferis/RANN
Versions 2.5
License GPL (>= 3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-rann

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-rann

and update with:

conda update r-rann

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-rann.