r-rcircos

downloads

A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.

Home http://bitbucket.org/henryhzhang/rcircos
Versions 1.1.3, 1.2.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-rcircos

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-rcircos

and update with:

conda update r-rcircos

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-rcircos.