tetoolkit

downloads

Tools for estimating differential enrichment of Transposable Elements and other highly repetitive regions

Home http://hammelllab.labsites.cshl.edu/software#TEToolkit
Versions 1.5.1
License GNU General Public License v3 (GPLv3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/tetoolkit

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tetoolkit

and update with:

conda update tetoolkit

docker

A Docker container is available at https://quay.io/repository/biocontainers/tetoolkit.