:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'avro-cwl' .. highlight: bash avro-cwl ======== .. conda:recipe:: avro-cwl :replaces_section_title: :noindex: Avro is a serialization and RPC framework. This package is a fork of regular avro made by the CWL team in order to fix some issues \(https\:\/\/github.com\/common\-workflow\-language\/cwltool\/issues\/524\) :homepage: https://pypi.python.org/pypi?:action=display&name=avro-cwl :license: APACHE / Apache 2.0 :recipe: /`avro-cwl `_/`meta.yaml `_ .. conda:package:: avro-cwl |downloads_avro-cwl| |docker_avro-cwl| :versions: ``1.8.9-0``,  ``1.8.4-1``,  ``1.8.4-0`` :depends python: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install avro-cwl and update with:: mamba update avro-cwl To create a new environment, run:: mamba create --name myenvname avro-cwl with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/avro-cwl: (see `avro-cwl/tags`_ for valid values for ````) .. |downloads_avro-cwl| image:: https://img.shields.io/conda/dn/bioconda/avro-cwl.svg?style=flat :target: https://anaconda.org/bioconda/avro-cwl :alt: (downloads) .. |docker_avro-cwl| image:: https://quay.io/repository/biocontainers/avro-cwl/status :target: https://quay.io/repository/biocontainers/avro-cwl .. _`avro-cwl/tags`: https://quay.io/repository/biocontainers/avro-cwl?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/avro-cwl/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/avro-cwl/README.html