:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bcbio-gff' .. highlight: bash bcbio-gff ========= .. conda:recipe:: bcbio-gff :replaces_section_title: :noindex: A Python library to read and write Generic Feature Format \(GFF\). :homepage: https://github.com/chapmanb/bcbb/tree/master/gff :license: Biopython License Agreement :recipe: /`bcbio-gff `_/`meta.yaml `_ .. conda:package:: bcbio-gff |downloads_bcbio-gff| |docker_bcbio-gff| :versions: .. raw:: html
0.7.1-00.7.0-10.7.0-00.6.9-10.6.9-00.6.8-00.6.7-00.6.6-10.6.6-0 ``0.7.1-0``,  ``0.7.0-1``,  ``0.7.0-0``,  ``0.6.9-1``,  ``0.6.9-0``,  ``0.6.8-0``,  ``0.6.7-0``,  ``0.6.6-1``,  ``0.6.6-0``,  ``0.6.4-1``,  ``0.6.4-0``,  ``0.6.2-1``,  ``0.6.2-0`` .. raw:: html
:depends biopython: ``<=1.81`` :depends bx-python: :depends python: :depends six: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bcbio-gff and update with:: mamba update bcbio-gff To create a new environment, run:: mamba create --name myenvname bcbio-gff with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bcbio-gff: (see `bcbio-gff/tags`_ for valid values for ````) .. |downloads_bcbio-gff| image:: https://img.shields.io/conda/dn/bioconda/bcbio-gff.svg?style=flat :target: https://anaconda.org/bioconda/bcbio-gff :alt: (downloads) .. |docker_bcbio-gff| image:: https://quay.io/repository/biocontainers/bcbio-gff/status :target: https://quay.io/repository/biocontainers/bcbio-gff .. _`bcbio-gff/tags`: https://quay.io/repository/biocontainers/bcbio-gff?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bcbio-gff/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bcbio-gff/README.html