:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-acgh' .. highlight: bash bioconductor-acgh ================= .. conda:recipe:: bioconductor-acgh :replaces_section_title: :noindex: Classes and functions for Array Comparative Genomic Hybridization data :homepage: https://bioconductor.org/packages/3.14/bioc/html/aCGH.html :license: GPL-2 :recipe: /`bioconductor-acgh `_/`meta.yaml `_ :links: biotools: :biotools:`acgh`, doi: :doi:`10.1093/bioinformatics/bti677` Functions for reading aCGH data from image analysis output files and clone information files\, creation of aCGH S3 objects for storing these data. Basic methods for accessing\/replacing\, subsetting\, printing and plotting aCGH objects. .. conda:package:: bioconductor-acgh |downloads_bioconductor-acgh| |docker_bioconductor-acgh| :versions: .. raw:: html
1.72.0-11.72.0-01.70.0-01.68.0-11.68.0-01.66.0-01.64.0-01.62.0-11.60.0-0 ``1.72.0-1``,  ``1.72.0-0``,  ``1.70.0-0``,  ``1.68.0-1``,  ``1.68.0-0``,  ``1.66.0-0``,  ``1.64.0-0``,  ``1.62.0-1``,  ``1.60.0-0``,  ``1.58.0-0``,  ``1.56.0-0``,  ``1.54.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-multtest: ``>=2.50.0,<2.51.0`` :depends libblas: ``>=3.8.0,<4.0a0`` :depends libgcc-ng: ``>=10.3.0`` :depends liblapack: ``>=3.8.0,<4.0a0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-cluster: :depends r-survival: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-acgh and update with:: conda update bioconductor-acgh or use the docker container:: docker pull quay.io/biocontainers/bioconductor-acgh: (see `bioconductor-acgh/tags`_ for valid values for ````) .. |downloads_bioconductor-acgh| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-acgh.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-acgh :alt: (downloads) .. |docker_bioconductor-acgh| image:: https://quay.io/repository/biocontainers/bioconductor-acgh/status :target: https://quay.io/repository/biocontainers/bioconductor-acgh .. _`bioconductor-acgh/tags`: https://quay.io/repository/biocontainers/bioconductor-acgh?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-acgh/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-acgh/README.html