:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-ahcytobands' .. highlight: bash bioconductor-ahcytobands ======================== .. conda:recipe:: bioconductor-ahcytobands :replaces_section_title: :noindex: CytoBands for AnnotationHub :homepage: https://bioconductor.org/packages/3.18/data/annotation/html/AHCytoBands.html :license: Artistic-2.0 :recipe: /`bioconductor-ahcytobands `_/`meta.yaml `_ Supplies AnnotationHub with CytoBand information from UCSC. There is a track for each major organism. Giemsa\-stained bands are commonly used to decorate chromosomal overviews in visualizations of genomic data. .. conda:package:: bioconductor-ahcytobands |downloads_bioconductor-ahcytobands| |docker_bioconductor-ahcytobands| :versions: .. raw:: html
0.99.1-40.99.1-30.99.1-20.99.1-10.99.1-00.99.0-70.99.0-60.99.0-50.99.0-4 ``0.99.1-4``,  ``0.99.1-3``,  ``0.99.1-2``,  ``0.99.1-1``,  ``0.99.1-0``,  ``0.99.0-7``,  ``0.99.0-6``,  ``0.99.0-5``,  ``0.99.0-4``,  ``0.99.0-3``,  ``0.99.0-2``,  ``0.99.0-1``,  ``0.99.0-0`` .. raw:: html
:depends bioconductor-data-packages: ``>=20231203`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-ahcytobands and update with:: mamba update bioconductor-ahcytobands To create a new environment, run:: mamba create --name myenvname bioconductor-ahcytobands with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-ahcytobands: (see `bioconductor-ahcytobands/tags`_ for valid values for ````) .. |downloads_bioconductor-ahcytobands| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-ahcytobands.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-ahcytobands :alt: (downloads) .. |docker_bioconductor-ahcytobands| image:: https://quay.io/repository/biocontainers/bioconductor-ahcytobands/status :target: https://quay.io/repository/biocontainers/bioconductor-ahcytobands .. _`bioconductor-ahcytobands/tags`: https://quay.io/repository/biocontainers/bioconductor-ahcytobands?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ahcytobands/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-ahcytobands/README.html