:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-biodbkegg'
.. highlight: bash

bioconductor-biodbkegg
======================

.. conda:recipe:: bioconductor-biodbkegg
   :replaces_section_title:
   :noindex:

   biodbKegg\, a library for connecting to the KEGG Database

   :homepage: https://bioconductor.org/packages/3.18/bioc/html/biodbKegg.html
   :license: AGPL-3
   :recipe: /`bioconductor-biodbkegg <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-biodbkegg>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-biodbkegg/meta.yaml>`_

   The biodbKegg library is an extension of the biodb framework package that provides access to the KEGG databases Compound\, Enzyme\, Genes\, Module\, Orthology and Reaction. It allows to retrieve entries by their accession numbers. Web services like \"find\"\, \"list\" and \"findExactMass\" are also available. Some functions for navigating along the pathways have also been implemented.


.. conda:package:: bioconductor-biodbkegg

   |downloads_bioconductor-biodbkegg| |docker_bioconductor-biodbkegg|

   :versions:
      
      

      ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.0.0-0``

      

   
   :depends bioconductor-biodb: ``>=1.10.0,<1.11.0``
   :depends r-base: ``>=4.3,<4.4.0a0``
   :depends r-chk: 
   :depends r-lifecycle: 
   :depends r-r6: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-biodbkegg

   and update with::

      mamba update bioconductor-biodbkegg

  To create a new environment, run::

      mamba create --name myenvname bioconductor-biodbkegg

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-biodbkegg:<tag>

   (see `bioconductor-biodbkegg/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-biodbkegg| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-biodbkegg.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-biodbkegg
   :alt:   (downloads)
.. |docker_bioconductor-biodbkegg| image:: https://quay.io/repository/biocontainers/bioconductor-biodbkegg/status
   :target: https://quay.io/repository/biocontainers/bioconductor-biodbkegg
.. _`bioconductor-biodbkegg/tags`: https://quay.io/repository/biocontainers/bioconductor-biodbkegg?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-biodbkegg";
        var versions = ["1.8.0","1.6.0","1.4.0","1.0.0"];
    </script>






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-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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