:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-bsgenome.creinhardtii.jgi.v5.6'
.. highlight: bash

bioconductor-bsgenome.creinhardtii.jgi.v5.6
===========================================

.. conda:recipe:: bioconductor-bsgenome.creinhardtii.jgi.v5.6
   :replaces_section_title:
   :noindex:

   Full genome sequences for Chlamydomonas reinhardtii \(v5.6\)

   :homepage: https://bioconductor.org/packages/3.18/data/annotation/html/BSgenome.Creinhardtii.JGI.v5.6.html
   :license: Artistic-2.0
   :recipe: /`bioconductor-bsgenome.creinhardtii.jgi.v5.6 <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-bsgenome.creinhardtii.jgi.v5.6>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-bsgenome.creinhardtii.jgi.v5.6/meta.yaml>`_

   Full genome sequences for Chlamydomonas reinhardtii \(v5.6\) as provided by JGI and stored in Biostrings objects. The data in this package is public. See \'citation\(\"BSgenome.Creinhardtii.JGI.v5.6\"\)\' for how to cite in publications.


.. conda:package:: bioconductor-bsgenome.creinhardtii.jgi.v5.6

   |downloads_bioconductor-bsgenome.creinhardtii.jgi.v5.6| |docker_bioconductor-bsgenome.creinhardtii.jgi.v5.6|

   :versions:
      
      

      ``1.5.0-5``,  ``1.5.0-4``,  ``1.5.0-3``,  ``1.5.0-2``,  ``1.5.0-1``,  ``1.5.0-0``

      

   
   :depends bioconductor-bsgenome: ``>=1.70.0,<1.71.0``
   :depends bioconductor-data-packages: ``>=20231203``
   :depends curl: 
   :depends r-base: ``>=4.3,<4.4.0a0``
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-bsgenome.creinhardtii.jgi.v5.6

   and update with::

      mamba update bioconductor-bsgenome.creinhardtii.jgi.v5.6

  To create a new environment, run::

      mamba create --name myenvname bioconductor-bsgenome.creinhardtii.jgi.v5.6

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-bsgenome.creinhardtii.jgi.v5.6:<tag>

   (see `bioconductor-bsgenome.creinhardtii.jgi.v5.6/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-bsgenome.creinhardtii.jgi.v5.6| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-bsgenome.creinhardtii.jgi.v5.6.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-bsgenome.creinhardtii.jgi.v5.6
   :alt:   (downloads)
.. |docker_bioconductor-bsgenome.creinhardtii.jgi.v5.6| image:: https://quay.io/repository/biocontainers/bioconductor-bsgenome.creinhardtii.jgi.v5.6/status
   :target: https://quay.io/repository/biocontainers/bioconductor-bsgenome.creinhardtii.jgi.v5.6
.. _`bioconductor-bsgenome.creinhardtii.jgi.v5.6/tags`: https://quay.io/repository/biocontainers/bioconductor-bsgenome.creinhardtii.jgi.v5.6?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-bsgenome.creinhardtii.jgi.v5.6";
        var versions = ["1.5.0","1.5.0","1.5.0","1.5.0","1.5.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bsgenome.creinhardtii.jgi.v5.6/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-bsgenome.creinhardtii.jgi.v5.6/README.html