:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-chipxpressdata' .. highlight: bash bioconductor-chipxpressdata =========================== .. conda:recipe:: bioconductor-chipxpressdata :replaces_section_title: :noindex: ChIPXpress Pre\-built Databases :homepage: https://bioconductor.org/packages/3.18/data/experiment/html/ChIPXpressData.html :license: GPL (>=2) :recipe: /`bioconductor-chipxpressdata `_/`meta.yaml `_ Contains pre\-built mouse \(GPL1261\) and human \(GPL570\) database of gene expression profiles to be used for ChIPXpress ranking. .. conda:package:: bioconductor-chipxpressdata |downloads_bioconductor-chipxpressdata| |docker_bioconductor-chipxpressdata| :versions: .. raw:: html
1.36.0-01.35.0-01.32.0-11.32.0-01.30.0-01.28.0-01.24.0-01.22.0-11.22.0-0 ``1.36.0-0``,  ``1.35.0-0``,  ``1.32.0-1``,  ``1.32.0-0``,  ``1.30.0-0``,  ``1.28.0-0``,  ``1.24.0-0``,  ``1.22.0-1``,  ``1.22.0-0``,  ``1.20.0-0``,  ``1.18.0-0``,  ``1.16.0-0`` .. raw:: html
:depends bioconductor-data-packages: ``>=20221106`` :depends curl: :depends r-base: ``>=4.2,<4.3.0a0`` :depends r-bigmemory: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-chipxpressdata and update with:: mamba update bioconductor-chipxpressdata To create a new environment, run:: mamba create --name myenvname bioconductor-chipxpressdata with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-chipxpressdata: (see `bioconductor-chipxpressdata/tags`_ for valid values for ````) .. |downloads_bioconductor-chipxpressdata| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-chipxpressdata.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-chipxpressdata :alt: (downloads) .. |docker_bioconductor-chipxpressdata| image:: https://quay.io/repository/biocontainers/bioconductor-chipxpressdata/status :target: https://quay.io/repository/biocontainers/bioconductor-chipxpressdata .. _`bioconductor-chipxpressdata/tags`: https://quay.io/repository/biocontainers/bioconductor-chipxpressdata?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-chipxpressdata/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-chipxpressdata/README.html