:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-curatedcrcdata' .. highlight: bash bioconductor-curatedcrcdata =========================== .. conda:recipe:: bioconductor-curatedcrcdata :replaces_section_title: :noindex: Colorectal Cancer Gene Expression Analysis :homepage: https://bioconductor.org/packages/3.18/data/experiment/html/curatedCRCData.html :license: Artistic-2.0 :recipe: /`bioconductor-curatedcrcdata `_/`meta.yaml `_ The curatedCRC package provides relevant functions and data for gene expression analysis in patients with colorectal cancer. .. conda:package:: bioconductor-curatedcrcdata |downloads_bioconductor-curatedcrcdata| |docker_bioconductor-curatedcrcdata| :versions: .. raw:: html
2.34.0-02.32.0-02.29.0-02.26.0-12.26.0-02.24.0-02.22.0-12.22.0-02.21.0-0 ``2.34.0-0``,  ``2.32.0-0``,  ``2.29.0-0``,  ``2.26.0-1``,  ``2.26.0-0``,  ``2.24.0-0``,  ``2.22.0-1``,  ``2.22.0-0``,  ``2.21.0-0``,  ``2.20.0-0``,  ``2.18.0-0``,  ``2.16.0-1``,  ``2.14.0-0`` .. raw:: html
:depends bioconductor-biocgenerics: ``>=0.48.0,<0.49.0`` :depends bioconductor-data-packages: ``>=20231203`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-nlme: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-curatedcrcdata and update with:: mamba update bioconductor-curatedcrcdata To create a new environment, run:: mamba create --name myenvname bioconductor-curatedcrcdata with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-curatedcrcdata: (see `bioconductor-curatedcrcdata/tags`_ for valid values for ````) .. |downloads_bioconductor-curatedcrcdata| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-curatedcrcdata.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-curatedcrcdata :alt: (downloads) .. |docker_bioconductor-curatedcrcdata| image:: https://quay.io/repository/biocontainers/bioconductor-curatedcrcdata/status :target: https://quay.io/repository/biocontainers/bioconductor-curatedcrcdata .. _`bioconductor-curatedcrcdata/tags`: https://quay.io/repository/biocontainers/bioconductor-curatedcrcdata?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-curatedcrcdata/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-curatedcrcdata/README.html