:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-data-packages' .. highlight: bash bioconductor-data-packages ========================== .. conda:recipe:: bioconductor-data-packages :replaces_section_title: :noindex: A package to enable downloading and installation of Bioconductor data packages :homepage: https://github.com/bioconda/bioconda-utils :license: MIT :recipe: /`bioconductor-data-packages `_/`meta.yaml `_ .. conda:package:: bioconductor-data-packages |downloads_bioconductor-data-packages| |docker_bioconductor-data-packages| :versions: .. raw:: html
20231203-020231202-020230718-120230717-120230717-020230713-020230706-020230420-020230202-0 ``20231203-0``,  ``20231202-0``,  ``20230718-1``,  ``20230717-1``,  ``20230717-0``,  ``20230713-0``,  ``20230706-0``,  ``20230420-0``,  ``20230202-0``,  ``20221112-0``,  ``20221111-3``,  ``20221111-2``,  ``20221111-1``,  ``20221111-0``,  ``20221110-2``,  ``20221110-1``,  ``20221110-0``,  ``20221109-2``,  ``20221109-1``,  ``20221109-0``,  ``20221108-1``,  ``20221108-0``,  ``20221107-1``,  ``20221106-3``,  ``20221105-1``,  ``20221104-2``,  ``20221103-0``,  ``20221027-0`` .. raw:: html
:depends curl: :depends r-base: :depends yq: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-data-packages and update with:: mamba update bioconductor-data-packages To create a new environment, run:: mamba create --name myenvname bioconductor-data-packages with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-data-packages: (see `bioconductor-data-packages/tags`_ for valid values for ````) .. |downloads_bioconductor-data-packages| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-data-packages.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-data-packages :alt: (downloads) .. |docker_bioconductor-data-packages| image:: https://quay.io/repository/biocontainers/bioconductor-data-packages/status :target: https://quay.io/repository/biocontainers/bioconductor-data-packages .. _`bioconductor-data-packages/tags`: https://quay.io/repository/biocontainers/bioconductor-data-packages?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-data-packages/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-data-packages/README.html